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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Synj2bp, synaptojanin 2 binding protein
Sequence ID:NM_025292
Entrez Gene ID:24071
Ensembl ID:ENSMUSG00000090935

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 D2|12 38.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:12: 81501738 - 81532889

NM_025292 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
399738259318282603152
9974100698260553082605625
10070102068261181582611951
10207103988263370282633893

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4483925IncompleteBC027433synaptojanin 2 binding protein
100016099BC152861synaptojanin 2 binding protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079568  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025292 NP_079568 Q9D6K5 PDZ

Related Sequences

 
mRNAGenPeptSwissProt
BC027433 AAH27433 Q9D6K5
BC152861 AAI52862  
AY071903 AAL60065 Q9D6K5
AY138960 AAN17786 Q9D6K5
AY566156 AAT70239 Q9D6K5
AK008054 BAB25432 Q9D6K5
AK013474 BAB28873 Q9D6K5
AK033514 BAC28333 Q9D6K5
AK163362 BAE37317 Q9D6K5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Synj2bp NP_079568 R.norvegicus Synj2bp 64531   NP_072121 96
H.sapiens SYNJ2BP 55333 Gene Info NP_060843 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)