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Gene Info

Gene Information For:Mm. Cfdp1, craniofacial development protein 1
Sequence ID:NM_011801
Entrez Gene ID:23837
Ensembl ID:ENSMUSG00000031954

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, stem cell, synovium, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 E1|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 111768472 - 111854310

NM_011801 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1315114292372114292686
316474114303150114303308
475594114354769114354888
595722114364257114364384
723930114365682114365889
9311048114368993114369110
10491215114378043114378209

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3964401Full LengthBC005589craniofacial development protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035931  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011801 NP_035931 O88271 BCNT

Related Sequences

 
mRNAGenPeptSwissProt
BC005589 AAH05589 O88271
AB010828 BAA31696 O88271
AK133989 BAE21971 O88271
AK160532 BAE35849 O88271
Y08219 CAA69396 O88271

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cfdp1 NP_035931 R.norvegicus Cfdp1 292027   NP_955410 93
H.sapiens CFDP1 10428 Gene Info NP_006315 84
A.gambiae AgaP_AGAP005152 1274833   XP_314040 38
D.melanogaster Yeti 7354404   NP_001137537 34
S.cerevisiae SWC5 852532   NP_009790 30
N.crassa NCU06491 3873269   XP_957131 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)