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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Npnt, Nephronectin
Sequence ID:NM_033525
NM_001029836
Entrez Gene ID:114249
Ensembl ID:ENSMUSG00000040998

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 G3|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 132882695 - 132950291

 Exon Info From UCSC:
NM_033525
NM_001029836

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30472074Full LengthBC068308nephronectin
5149204IncompleteBC046642nephronectin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_277060  NP_001025007  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001029836 NP_001025007 Q91V88 MAM
EGF_CA
EGF_2
NM_033525 NP_277060   MAM
EGF_CA
EGF_2

Related Sequences

 
mRNAGenPeptSwissProt
BC046642 AAH46642 Q91V88
BC068308 AAH68308 Q91V88
AF397007 AAK84391 Q91V88
AF397008 AAK84392 Q91V88
AY035898 AAK96010 Q91V88
AY035899 AAK96011 Q91V88
AB059656 BAB69692 Q91V88
AK050484 BAC34283 Q91V88
AK158764 BAE34649 Q3TYB4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Npnt NP_277060 H.sapiens NPNT 255743 Gene Info NP_001171620 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)