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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tanc1, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
Sequence ID:NM_198294
Entrez Gene ID:66860
Ensembl ID:ENSMUSG00000035168

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 C1.1|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 59795929 - 59845715

 Exon Info From UCSC:
NM_198294

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9055980Full LengthBC141367tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
30668628Full LengthBC079914tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
3966727IncompleteBC047437tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
6506175IncompleteBC050873tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_938036  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_198294 NP_938036 Q0VGY8 Ank
TPR_1
TPR_2

Related Sequences

 
mRNAGenPeptSwissProt
BC047437 AAH47437 Q0VGY8
BC050873 AAH50873 Q80YQ9
BC079914 AAH79914 Q0VGY8
BC141367 AAI41368 B9EJ77
AK030022 BAC26741 Q0VGY8
AB093299 BAC41481 Q8CHA0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tanc1 NP_938036 R.norvegicus Tanc1 311055   NP_001002854 95
H.sapiens TANC1 85461 Gene Info NP_203752 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)