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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pbrm1, polybromo 1
Sequence ID:NM_001081251
NM_025847
Entrez Gene ID:66923
Ensembl ID:ENSMUSG00000042323

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14|14 B

Chromosomal Position (from UCSC)

Chromosomal Position:14: 31089551 - 31120020


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069544Full LengthBC172736polybromo 1
4946106IncompleteBC029037polybromo 1
4973507IncompleteBC024438polybromo 1
5029043IncompleteBC023452polybromo 1
5250197IncompleteBC025605polybromo 1
5352289IncompleteBC037018polybromo 1
100069417BC172609polybromo 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001081251 NP_001074720    

Related Sequences

 
mRNAGenPeptSwissProt
BC023452 AAH23452 Q8BSQ9
BC025605 AAH25605 Q8R134
BC029037 AAH29037 Q8BSQ9
BC055456 AAH55456 Q8BSQ9
BC055708 AAH55708 Q8BSQ9
BC172609 AAI72609  
BC172736 AAI72736  
AK009120 BAB26085 Q9D7L7
AK009582 BAB26374 Q8BSQ9
AK030781 BAC27136 Q8BSQ9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pbrm1 NP_001074720 R.norvegicus Pbrm1 306254   XP_240329 99
H.sapiens PBRM1 55193 Gene Info NP_060635 98
A.gambiae AgaP_AGAP001099 1282065   XP_322068 43
D.melanogaster polybromo 42954   NP_651288 42
C.elegans pbrm-1 172504   NP_001021008 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)