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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Amacr, alpha-methylacyl-CoA racemase
Sequence ID:NM_008537
Entrez Gene ID:17117
Ensembl ID:ENSMUSG00000022244

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15|15 B1

Chromosomal Position (from UCSC)

Chromosomal Position:15: 10981788 - 10995602

NM_008537 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12981091151010911807
2994421091310410913247
4436031091444010914600
6047901091851310918699
79125751092459410926378

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3980103Full LengthBC015825alpha-methylacyl-CoA racemase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032563  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_008537 NP_032563 O09174 EC 5.1.99.4 CoA_transf_3

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U89906 AAB72146 O09174 EC 5.1.99.4
BC015825 AAH15825 Q91YQ8  
AK002401 BAB22072 O09174 EC 5.1.99.4
AK048249 BAC33284 O09174 EC 5.1.99.4
AK160586 BAE35893 Q3TUS8  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Amacr NP_032563 R.norvegicus Amacr 25284   NP_036948 90
H.sapiens AMACR 23600 Gene Info NP_055139 77
D.melanogaster CG9319 35337   NP_610054 54
A.gambiae AgaP_AGAP008414 1277563   XP_317033 53
N.crassa NCU04099 3877008   XP_960861 50
C.elegans C24A3.4 181140   NP_509517 46
C.elegans ZK892.4 174559   NP_496163 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)