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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Grin1, Glutamate receptor, ionotropic, NMDA1 (zeta 1)
Sequence ID:NM_001177656
NM_001177657
NM_008169
Entrez Gene ID:14810
Ensembl ID:ENSMUSG00000026959

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 A3|2 12.0

Chromosomal Position (from UCSC)

Chromosomal Position:2: 25310800 - 25319126

 Exon Info From UCSC:
NM_001177656
NM_001177657
NM_008169

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4507986Full LengthBC039157glutamate receptor, ionotropic, NMDA1 (zeta 1)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032195  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001177656 NP_001171127    
NM_001177657 NP_001171128    
NM_008169 NP_032195 P35438 Lig_chan
ANF_receptor

Related Sequences

 
mRNAGenPeptSwissProt
BC039157 AAH39157 P35438
D10028 BAA00920 P35438
AK158140 BAE34379 Q3TZ31

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Grin1 NP_032195 R.norvegicus Grin1 24408   NP_058706 100
H.sapiens GRIN1 2902 Gene Info NP_001172019 99
A.gambiae AgaP_AGAP001478 1281696   XP_321646 51
D.melanogaster Nmdar1 40665   NP_730940 50
C.elegans nmr-1 173929   NP_495033 36
A.thaliana GLR5 817801   NP_565744 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta