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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ncor2, nuclear receptor co-repressor 2
Sequence ID:NM_001253904
NM_001253905
NM_011424
Entrez Gene ID:20602
Ensembl ID:ENSMUSG00000029478

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 125017834 - 125179199


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4526899IncompleteBC047524nuclear receptor co-repressor 2
100063194BC156549nuclear receptor co-repressor 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035554  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001253904 NP_001240833    
NM_001253905 NP_001240834    
NM_011424 NP_035554   Myb_DNA-binding

Related Sequences

 
mRNAGenPeptSwissProt
AF113002 AAD20945 Q9WU42
AF125671 AAD22972 Q9WU42
BC047524 AAH47524 Q80ZV7
BC156549 AAI56550  
AK158191 BAE34400 Q3TZ10
AK161209 BAE36241 Q3TTT3
AK168836 BAE40660 Q3TG88

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ncor2 NP_035554 R.norvegicus Ncor2 360801   NP_001101804 98
H.sapiens NCOR2 9612 Gene Info NP_006303 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta