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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Klc1, kinesin light chain 1
Sequence ID:NM_001025360
NM_001081959
NM_008450
NM_001025358
NM_001025359
NM_001025361
NM_001025362
NM_001025363
Entrez Gene ID:16593
Ensembl ID:ENSMUSG00000021288

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, skin, spleen, stem cell, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12 F1|12 57.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:12: 111758955 - 111794897

 Exon Info From UCSC:
NM_001025360
NM_001081959
NM_008450

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6415280Full LengthBC055744kinesin light chain 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032476  NP_001020531  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001025360 NP_001020531 Q7M700 TPR_1
NM_001081959 NP_001075428    
NM_008450 NP_032476 Q7M703 TPR_1

Related Sequences

 
mRNAGenPeptSwissProt
AF055665 AAC27740 O88447
Q7M703
BC055744 AAH55744 Q7TNF4
AY753300 AAV30550 Q5UE59
AK031309 BAC27341 Q8CD76
BK000668 DAA01269 Q7M703
BK000669 DAA01270 Q7M702
BK000670 DAA01271 Q7M701
BK000671 DAA01272 Q7M700
BK000672 DAA01273 Q7M6Z9
BK000673 DAA01274 Q7M6Z8
BK000674 DAA01275 Q7M6Z7
BK000675 DAA01276 Q7M6Z6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Klc1 NP_001020531 R.norvegicus Klc1 171041   NP_001075441 98
H.sapiens KLC1 3831 Gene Info NP_001123579 97
D.melanogaster Klc 39445   NP_524049 73
A.gambiae AgaP_AGAP010258 1279680   XP_319447 70
C.elegans klc-2 178942   NP_001023664 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)