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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sstr1, somatostatin receptor 1
Sequence ID:NM_009216
Entrez Gene ID:20605
Ensembl ID:ENSMUSG00000035431

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 C1|12 23.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:12: 58211803 - 58214444

NM_009216 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1785931279059312867
7938695931323259317022

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100014330BC140315somatostatin receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033242  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009216 NP_033242 Q543T0
P30873
7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC140315 AAI40316  
AK046464 BAC32742 Q543T0
P30873

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sstr1 NP_033242 H.sapiens SSTR1 6751 Gene Info NP_001040 99
R.norvegicus Sstr1 25033   NP_036851 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)