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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Hexb, hexosaminidase B
Sequence ID:NM_010422
Entrez Gene ID:15212
Ensembl ID:ENSMUSG00000021665

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:13 D1|13 46.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:13: 97176336 - 97198293

 Exon Info From UCSC:
NM_010422

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015010Full LengthBC146503hexosaminidase B
100014336BC140360hexosaminidase B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034552  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_010422 NP_034552 Q3TXR9
P20060
EC 3.2.1.52 Glyco_hydro_20
Glyco_hydro_20b

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U07633 AAA18776 Q3TXR9
P20060
EC 3.2.1.52
BC140360 AAI40361    
BC146503 AAI46504    
AK151149 BAE30155 Q3TXR9
P20060
EC 3.2.1.52
AK159134 BAE34846 Q3TXR9
P20060
EC 3.2.1.52
AK159178 BAE34877 Q3TXR9
P20060
EC 3.2.1.52
AK160560 BAE35874 Q3TXR9
P20060
EC 3.2.1.52
AK168825 BAE40652 Q3TXR9
P20060
EC 3.2.1.52
Y00964 CAA68781 Q3TXR9
P20060
EC 3.2.1.52

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hexb NP_034552 R.norvegicus Hexb 294673   NP_001011946 86
H.sapiens HEXB 3074 Gene Info NP_000512 77
A.gambiae AgaP_AGAP010056 1279486   XP_319210 48
C.elegans hex-1 180533   NP_508409 46
A.thaliana HEXO1 824692   NP_567017 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)