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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ino80b, INO80 complex subunit B
Sequence ID:NM_023547
Entrez Gene ID:70020
Ensembl ID:ENSMUSG00000030034

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6|6 D1

Chromosomal Position (from UCSC)

Chromosomal Position:6: 83121769 - 83125131

NM_023547 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15378307182183072357
5387078307398783074156
7088268307430083074418
82710198307457883074770
102010388307500483075022

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5010975Full LengthBC019383INO80 complex subunit B
6440887Full LengthBC058788INO80 complex subunit B
6509498IncompleteBC047990INO80 complex subunit B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_076036  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_023547 NP_076036 Q99PT3 zf-HIT
PAPA-1

Related Sequences

 
mRNAGenPeptSwissProt
BC019383 AAH19383 Q99PT3
BC047990 AAH47990 Q80ZV5
BC058788 AAH58788 Q99PT3
AK010946 BAB27284 Q99PT3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ino80b NP_076036 R.norvegicus Ino80b 500225   NP_001041698 99
H.sapiens INO80B 83444 Gene Info NP_112578 94
D.melanogaster CG10395 35490   NP_610167 38
A.gambiae AgaP_AGAP006175 1276843   XP_316235 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)