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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pomc, pro-opiomelanocortin-alpha
Sequence ID:NM_008895
Entrez Gene ID:18976
Ensembl ID:ENSMUSG00000020660

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 A1.1|12 4.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:12: 3954950 - 3960618

NM_008895 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19639549503955045
9728139580753958259
282100739598923960617

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30253829Full LengthBC061215pro-opiomelanocortin-alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032921  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008895 NP_032921 P01193 ACTH_domain
Op_neuropeptide
NPP

Related Sequences

 
mRNAGenPeptSwissProt
M30489 AAA37169 P01193
BC061215 AAH61215 P01193
AK017492 BAB30771 P01193
AK017581 BAB30818 P01193
AK030714 BAC27095 P01193
AK077426 BAC36795 P01193
AK133592 BAE21739 P01193
AK133646 BAE21764 P01193
AK133740 BAE21815 P01193
AK133776 BAE21833 P01193
AK133800 BAE21850 P01193

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pomc NP_032921 R.norvegicus Pomc 24664   NP_647542 94
H.sapiens POMC 5443 Gene Info NP_000930 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)