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Gene Info

Gene Information For:Mm. Ptpn1, protein tyrosine phosphatase, non-receptor type 1
Sequence ID:NM_011201
Entrez Gene ID:19246
Ensembl ID:ENSMUSG00000027540

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H3|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 167976898 - 167979228

NM_011201 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1230167757826167758055
231321167789127167789217
322422167790509167790609
423521167793228167793326
522659167797192167797329
660869167799559167799768
8701031167800228167800389
10321252167800808167801028
12534213167801924167804884

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3156854Full LengthBC010191protein tyrosine phosphatase, non-receptor type 1
3595762IncompleteBC005729protein tyrosine phosphatase, non-receptor type 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035331  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_011201 NP_035331 P35821 EC 3.1.3.48 Y_phosphatase
DSPc

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC005729 AAH05729 P35821 EC 3.1.3.48
BC010191 AAH10191 P35821
Q3TZW9
EC 3.1.3.48
AK149979 BAE29209 P35821
Q3TZW9
EC 3.1.3.48
AK150322 BAE29467 Q3UCZ5  
AK157431 BAE34088 P35821
Q3TZW9
EC 3.1.3.48
AK166020 BAE38525 P35821
Q3TZW9
EC 3.1.3.48
AK168772 BAE40608 P35821
Q3TZW9
EC 3.1.3.48
AK170620 BAE41915 P35821
Q3TZW9
EC 3.1.3.48
AK171380 BAE42421 Q3TB93  
AK172206 BAE42881 Q3T9Y9  
Z23057 CAA80592 P35821 EC 3.1.3.48

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ptpn1 NP_035331 R.norvegicus Ptpn1 24697   NP_036769 94
H.sapiens PTPN1 5770 Gene Info NP_002818 84
D.melanogaster Ptp61F 38160   NP_476687 50
A.gambiae AgaP_AGAP005352 1276060   XP_315365 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)