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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Kdm3b, KDM3B lysine (K)-specific demethylase 3B
Sequence ID:NM_001081256
Entrez Gene ID:277250
Ensembl ID:ENSMUSG00000038773

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18|18 B3

Chromosomal Position (from UCSC)

Chromosomal Position:18: 34830200 - 34838908

 Exon Info From UCSC:
NM_001081256

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9087997Full LengthBC151084jumonji domain containing 1B
5036868IncompleteBC031981jumonji domain containing 1B
5360429IncompleteBC038376jumonji domain containing 1B
6406868IncompleteBC060727jumonji domain containing 1B
30362021IncompleteBC108415jumonji domain containing 1B

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001081256 NP_001074725    

Related Sequences

 
mRNAGenPeptSwissProt
BC031981 AAH31981 Q6ZPY7
BC038376 AAH38376 Q6ZPY7
BC060727 AAH60727 Q6ZPY7
BC108415 AAI08416 Q6ZPY7
BC151084 AAI51085 B9EKS2
AK018027 BAB31043 Q6ZPY7
AK033343 BAC28239 Q6ZPY7
AK129281 BAC98091 Q6ZPY7
AK147120 BAE27692 Q3UI14
AK163281 BAE37274 Q3TQV8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Kdm3b NP_001074725 H.sapiens KDM3B 51780 Gene Info NP_057688 94
A.gambiae AgaP_AGAP002682 1273280   XP_312242 54
D.melanogaster CG8165 41143   NP_788611 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)