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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Arl5c, ADP-ribosylation factor-like 5C
Sequence ID:NM_207231
Entrez Gene ID:217151
Ensembl ID:ENSMUSG00000038352

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 D|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 97993835 - 97995929

NM_207231 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
568159785089397851652
8169679785359597853746
96810519785473897854821
105211999785565197855798
120012609785638097856440
126116169785713197857486

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3824354Full LengthBC065791ADP-ribosylation factor-like 5C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_997114  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_207231 NP_997114 Q6P068 Arf

Related Sequences

 
mRNAGenPeptSwissProt
BC065791 AAH65791 Q6P068
AK138099 BAE23553 Q3UUS1
AK171194 BAE42304 Q6P068

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Arl5c NP_997114 R.norvegicus Arl5c 497990   NP_001102516 93
H.sapiens ARL5C 390790 Gene Info NP_001137440 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)