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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Rabggtb, RAB geranylgeranyl transferase, b subunit
Sequence ID:NM_001163478
NM_001163479
NM_011231
NR_028094
NR_028095
NR_028096
NR_028097
NR_028098
Entrez Gene ID:19352
Ensembl ID:ENSMUSG00000038975

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 H3|3 76.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 153907289 - 153910719

 Exon Info From UCSC:
NM_001163478
NM_001163479
NM_011231

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861567Full LengthBC138547RAB geranylgeranyl transferase, b subunit
40130750Full LengthBC132473RAB geranylgeranyl transferase, b subunit
3487367IncompleteBC003948RAB geranylgeranyl transferase, b subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035361  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001163478 NP_001156950      
NM_001163479 NP_001156951      
NM_011231 NP_035361 P53612 EC 2.5.1.60 Prenyltrans

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U12922 AAB01502 P53612 EC 2.5.1.60
AF231926 AAF76857 Q9JIF6  
BC003948 AAH03948 Q99KZ1  
BC057661 AAH57661 Q6PFA1  
BC132473 AAI32474 P53612 EC 2.5.1.60
BC138547 AAI38548 P53612 EC 2.5.1.60
AK010690 BAB27122 Q9CRG6  
AK160162 BAE35665 Q3TVF4  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rabggtb NP_001156950 R.norvegicus Rabggtb 25533   NP_619715 99
H.sapiens RABGGTB 5876 Gene Info NP_004573 96
D.melanogaster betaggt-II 47757   NP_524894 64
A.thaliana RGTB1 831094   NP_568259 58
A.thaliana RGTB2 820381   NP_850567 56
C.elegans B0280.1 175998   NP_498559 54
S.cerevisiae BET2 856306   NP_015502 53
N.crassa NCU07509 3881205   XP_965056 52
S.pombe ptb1 2543284   NP_593383 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)