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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ppt1, palmitoyl-protein thioesterase 1
Sequence ID:NM_008917
Entrez Gene ID:19063
Ensembl ID:ENSMUSG00000028657

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D1-D3|4 59.1 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 122836254 - 122858382

NM_008917 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1138122513484122513621
139248122521237122521346
249376122521660122521787
377447122523213122523283
448550122525675122525777
551641122530833122530923
642740122531622122531720
741812122533048122533119
8132478122534752122536417

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015706Full LengthBC148714palmitoyl-protein thioesterase 1
30096414IncompleteBC099945palmitoyl-protein thioesterase 1
100014693BC141455palmitoyl-protein thioesterase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032943  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_008917 NP_032943 Q8VBX5
O88531
EC 3.1.2.22 Palm_thioest

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF071025 AAC25398 Q8VBX5
O88531
EC 3.1.2.22
AF087568 AAD25224 O88531 EC 3.1.2.22
BC141455 AAI41456 O88531 EC 3.1.2.22
BC148714 AAI48715    
AF326557 AAL37403 Q8VBX5  
AF326558 AAL37404 Q8VBX5  
AK148314 BAE28475 Q3UFT5  
AK151055 BAE30072 Q3UB92  
AK151107 BAE30117 Q3U6W3  
AK152474 BAE31248 O88531
Q3U6J9
EC 3.1.2.22
AK152940 BAE31611 Q3U6W3  
AK153106 BAE31725 O88531
Q3U6J9
EC 3.1.2.22
AK169579 BAE41238 Q3TEL0  
AK171668 BAE42600 Q3TAR8  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ppt1 NP_032943 R.norvegicus Ppt1 29411   NP_071947 95
H.sapiens PPT1 5538 Gene Info NP_000301 86
A.gambiae AgaP_AGAP001058 1272860   XP_311781 56
D.melanogaster Ppt1 31805   NP_727284 55
C.elegans ppt-1 191744   NP_504684 54
N.crassa NCU06530 3877950   XP_961802 37
A.thaliana AT3G60340 825205   NP_850728 35
S.pombe pdf1 2540904   NP_595325 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)