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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Calb1, calbindin 1
Sequence ID:NM_009788
Entrez Gene ID:12307
Ensembl ID:ENSMUSG00000028222

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 A2|4 10.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 15881263 - 15906123

 Exon Info From UCSC:
NM_009788

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4527000Full LengthBC016421calbindin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033918  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009788 NP_033918 P12658 efhand

Related Sequences

 
mRNAGenPeptSwissProt
M21531 AAA39898 P12658
M23663 AAA53198 P12658
BC016421 AAH16421 P12658
AK002635 BAB22249 P12658
AK005081 BAB23805 P12658
AK005243 BAB23900 P12658
AK028050 BAC25721 P12658
AK028327 BAC25882 Q8CEF3
AK048517 BAC33354 P12658
AK077499 BAC36831 P12658
AK078358 BAC37236 Q8C5H2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Calb1 NP_033918 R.norvegicus Calb1 83839   NP_114190 99
H.sapiens CALB1 793 Gene Info NP_004920 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)