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Gene Info

Gene Information For:Mm. Lrpap1, low density lipoprotein receptor-related protein associated protein 1
Sequence ID:NM_013587
Entrez Gene ID:16976
Ensembl ID:ENSMUSG00000029103

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 B2|5 20.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 35092978 - 35105704

NM_013587 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1618963543415435436034
189720733543749835437674
207421563543862435438706
215723153544017935440337
231624363544080135440921
243725583544180535441926
255927033544504335445187
270429223544812735448345

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6402163Full LengthBC094324low density lipoprotein receptor-related protein associated protein 1
5043229IncompleteBC057979low density lipoprotein receptor-related protein associated protein 1
5135375IncompleteBC046641low density lipoprotein receptor-related protein associated protein 1
5346882IncompleteBC032170low density lipoprotein receptor-related protein associated protein 1
6816167IncompleteBC059887low density lipoprotein receptor-related protein associated protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038615  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013587 NP_038615 Q5D0B0
P55302
Q52KI7
Alpha-2-MRAP_N
Alpha-2-MRAP_C

Related Sequences

 
mRNAGenPeptSwissProt
S67967 AAC60668 P55302
BC032170 AAH32170 Q8K295
BC046641 AAH46641 Q5D0B0
P55302
Q52KI7
BC057979 AAH57979 Q6PEM5
BC059887 AAH59887 Q6PB52
BC094324 AAH94324 Q5D0B0
P55302
Q52KI7
D00622 BAA00500 Q5D0B0
P55302
Q52KI7
AK089250 BAC40814 Q8C252
AK145710 BAE26604 Q5D0B0
P55302
Q52KI7
AK152062 BAE30918 Q3U8U9
AK166616 BAE38896 Q3TL96
AK166746 BAE38988 Q5D0B0
P55302
Q52KI7
AK166819 BAE39045 Q5D0B0
P55302
Q52KI7
AK169132 BAE40911 Q5D0B0
P55302
Q52KI7
AK171471 BAE42477 Q5D0B0
P55302
Q52KI7
AJ639614 CAG25840 Q6ZY49

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lrpap1 NP_038615 R.norvegicus Lrpap1 116565   NP_001162584 97
H.sapiens LRPAP1 4043 Gene Info NP_002328 76
A.gambiae AgaP_AGAP003521 1274170   XP_313261 36
D.melanogaster CG8507 41205   NP_649950 35
C.elegans C15C8.4 179745   NP_506187 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)