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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Trim30d, Tripartite motif-containing 30D
Sequence ID:NM_199146
NM_001167828
Entrez Gene ID:209387
Ensembl ID:ENSMUSG00000057596

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 E3|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 104470016 - 104507849

 Exon Info From UCSC:
NM_199146
NM_001167828

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5035734Full LengthBC056631expressed sequence AI451617

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_954597  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001167828 NP_001161300    
NM_199146 NP_954597 Q6PHA8 zf-C3HC4
SPRY
zf-B_box

Related Sequences

 
mRNAGenPeptSwissProt
BC056631 AAH56631 Q6PHA8
AK136456 BAE22986 Q3TNW3
AK164938 BAE37974 Q3TNW3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Trim30d NP_954597 M.musculus Trim30a 20128 Gene Info NP_033125 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)