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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Abca1, ATP-binding cassette, sub-family A (ABC1), member 1
Sequence ID:NM_013454
Entrez Gene ID:11303
Ensembl ID:ENSMUSG00000015243

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 A5-B3|4 23.1 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 53030788 - 53033851

 Exon Info From UCSC:
NM_013454

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069521Full LengthBC172713ATP-binding cassette, sub-family A (ABC1), member 1
100062880BC156410ATP-binding cassette, sub-family A (ABC1), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038482  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013454 NP_038482 P41233 ABC_tran

Related Sequences

 
mRNAGenPeptSwissProt
BC156410 AAI56411  
BC172713 AAI72713  
AK051920 BAC34811 Q8BPY1
X75926 CAA53530 P41233

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Abca1 NP_038482 R.norvegicus Abca1 313210   NP_835196 96
H.sapiens ABCA1 19 Gene Info NP_005493 95
A.thaliana ABCA1 818768   NP_850354 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta