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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Prkra, protein kinase, interferon inducible double stranded RNA dependent activator
Sequence ID:NM_011871
Entrez Gene ID:23992
Ensembl ID:ENSMUSG00000002731

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 C3|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 76629936 - 76647994

NM_011871 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16327646799376468624
6338077647158976471763
8089027647485176474945
90310207647725676477373
102110997647829776478375
110011817648127976481360
118213517648518176485350
135215547648584876486050

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3985758Full LengthBC011311protein kinase, interferon inducible double stranded RNA dependent activator

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036001  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011871 NP_036001 Q9WTX2 dsrm

Related Sequences

 
mRNAGenPeptSwissProt
AF083032 AAD33098 Q9WTX2
BC011311 AAH11311 Q9WTX2
AK012798 BAB28477 Q9WTX2
AK155112 BAE33056 Q9WTX2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Prkra NP_036001 R.norvegicus Prkra 311130   NP_001019951 99
H.sapiens PRKRA 8575 Gene Info NP_003681 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)