Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Paxip1, PAX interacting (with transcription-activation domain) protein 1
Sequence ID:NM_018878
Entrez Gene ID:55982
Ensembl ID:ENSMUSG00000002221

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 A3|5 11.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 27742047 - 27791550

 Exon Info From UCSC:
NM_018878

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5704566Full LengthBC066014PAX interacting (with transcription-activation domain) protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061366  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018878 NP_061366 Q6NZQ4 BRCT

Related Sequences

 
mRNAGenPeptSwissProt
AF104261 AAD17923 Q6NZQ4
BC066014 AAH66014 Q6NZQ4
AK144606 BAE25965 Q6NZQ4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Paxip1 NP_061366 R.norvegicus Paxip1 311944   NP_001101314 97
H.sapiens PAXIP1 22976 Gene Info NP_031375 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)