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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Nlrp12, NLR family, pyrin domain containing 12
Sequence ID:NM_001033431
Entrez Gene ID:378425

Database Links

UniGeneEntrez GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 A1|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 3221914 - 3228536

NM_001033431 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1105132215103222560
1052122232252463225416
1223139332283903228560
1394156432309683231138
1565173532330873233257
1736190632338753234045
1907207732351543235324
2078375832398303241510
3759383932453293245409
3840432932492513249740

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40093617Full LengthBC116252NLR family, pyrin domain containing 12
40093618Full LengthBC116253NLR family, pyrin domain containing 12

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001033431 NP_001028603 E9Q5R7  

Related Sequences

 
mRNAGenPeptSwissProt
BC116252 AAI16253 Q14BA2
BC116253 AAI16254 Q08EE9
AY364010 AAQ63460 Q6UQE6
AK149454 BAE28888 E9Q5R7
AK158158 BAE34388 Q3TZ22

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nlrp12 NP_001028603 R.norvegicus Nlrp12 292541   NP_001162613 90
H.sapiens NLRP12 91662 Gene Info NP_653288 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)