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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lig3, ligase III, DNA, ATP-dependent
Sequence ID:NM_010716
Entrez Gene ID:16882
Ensembl ID:ENSMUSG00000020697

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B5|11 48.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 82781197 - 82790304

 Exon Info From UCSC:
NM_010716

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3673103Full LengthBC083500ligase III, DNA, ATP-dependent
4504384Full LengthBC049240ligase III, DNA, ATP-dependent

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034846  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_010716 NP_034846 Q80ZH7   BRCT
zf-PARP
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U66057 AAC53003 P97386 EC 6.5.1.1
U66058 AAC53004 P97386 EC 6.5.1.1
BC049240 AAH49240 Q80ZH7  
BC083500 AAH83500 Q80ZH7  
AK143531 BAE25421 Q80ZH7  
AK150644 BAE29732 Q3UC82  
AK156018 BAE33548 Q3U1F0  
AK156030 BAE33553 Q3U0I5  
AK156825 BAE33868 Q3U0I5  
AK167363 BAE39460 Q3TJN5  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lig3 NP_034846 R.norvegicus Lig3 303369   NP_001012011 97
H.sapiens LIG3 3980 Gene Info NP_039269 88
D.melanogaster lig3 41518   NP_650187 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)