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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lep, leptin
Sequence ID:NM_008493
Entrez Gene ID:16846
Ensembl ID:ENSMUSG00000059201

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 A3.3|6 10.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 29060220 - 29073876

NM_008493 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1282901022029010247
292032901892029019094
20432572902082229023875

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40054245Full LengthBC125245leptin
1513077IncompleteBC038162leptin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032519  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008493 NP_032519 Q544U0
P41160
Leptin

Related Sequences

 
mRNAGenPeptSwissProt
U18812 AAA64564 Q544U0
P41160
BC125245 AAI25246 Q544U0
FJ374142 ACJ09173 Q544U0
HQ166716 ADM72802 E9M0G2
AK030984 BAC27202 Q544U0
P41160
AK142589 BAE25117 Q544U0
P41160

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lep NP_032519 R.norvegicus Lep 25608   NP_037208 96
H.sapiens LEP 3952 Gene Info NP_000221 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta