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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Tnfsf18, tumor necrosis factor (ligand) superfamily, member 18
Sequence ID:NM_183391
Entrez Gene ID:240873
Ensembl ID:ENSMUSG00000066755

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H2.1|1 84.95 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 161494654 - 161505290

NM_183391 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1191163424787163424977
192225163430601163430634
2262062163433582163435418

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860833Full LengthBC137814tumor necrosis factor (ligand) superfamily, member 18
8860834Full LengthBC137815tumor necrosis factor (ligand) superfamily, member 18

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_899247  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_183391 NP_899247 Q7TS55 TNF

Related Sequences

 
mRNAGenPeptSwissProt
BC137814 AAI37815 Q7TS55
BC137815 AAI37816 Q7TS55
AY234223 AAO89011 Q7TS55
AY320040 AAP70494 Q7TS55
AY267900 AAP96745 Q7TS55
AY359852 AAQ55265 Q7TS55
AJ577579 CAE12166 Q7TS55
AJ577580 CAE12167 Q7TS55

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tnfsf18 NP_899247 R.norvegicus Tnfsf18 364031   XP_344167 80
H.sapiens TNFSF18 8995 Gene Info NP_005083 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)