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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Atxn1l, ataxin 1-like
Sequence ID:NM_001080930
Entrez Gene ID:52335
Ensembl ID:ENSMUSG00000069895

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 D3|8 53.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 109726455 - 109728272

NM_001080930 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17292112250350112257641
72937351112259204112259262
73527417112259359112259424
74187526112261530112261638

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3326038IncompleteBC038886DNA segment, Chr 8, ERATO Doi 587, expressed

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001080930 NP_001074399    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atxn1l NP_001074399 R.norvegicus Atxn1l 307970   XP_226598 97
H.sapiens ATXN1L 342371 Gene Info NP_001131147 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)