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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ssbp1, single-stranded DNA binding protein 1
Sequence ID:NM_028358
NM_212468
Entrez Gene ID:381760
Ensembl ID:ENSMUSG00000029911

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6|6 B2

Chromosomal Position (from UCSC)

Chromosomal Position:6: 40471414 - 40478587

 Exon Info From UCSC:
NM_028358
NM_212468

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1314987Full LengthBC028648single-stranded DNA binding protein 1
30295766Full LengthBC061183single-stranded DNA binding protein 1
30134502IncompleteBC060290single-stranded DNA binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_997633  NP_082634  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028358 NP_082634 Q9CYR0 SSB
NM_212468 NP_997633 Q8R2K3 SSB

Related Sequences

 
mRNAGenPeptSwissProt
BC028648 AAH28648 Q8R2K3
BC061183 AAH61183 Q8R2K3
AK013425 BAB28850 Q9CYR0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ssbp1 NP_997633 R.norvegicus Ssbp1 54304   NP_899157 97
H.sapiens SSBP1 6742 Gene Info NP_003134 93
A.gambiae AgaP_AGAP002477 1273482   XP_312461 47
D.melanogaster mtSSB 41968   NP_001034057 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)