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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slurp1, secreted Ly6/Plaur domain containing 1
Sequence ID:NM_020519
Entrez Gene ID:57277
Ensembl ID:ENSMUSG00000022596

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 D3|15

Chromosomal Position (from UCSC)

Chromosomal Position:15: 74726645 - 74728024

NM_020519 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13197455707374557391
3204397455791174558030
4405257455837074558455

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40052992Full LengthBC111105secreted Ly6/Plaur domain containing 1
40053004Full LengthBC125244secreted Ly6/Plaur domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065265  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020519 NP_065265 Q9Z0K7 UPAR_LY6

Related Sequences

 
mRNAGenPeptSwissProt
BC111105 AAI11106 Q9Z0K7
BC125244 AAI25245 Q9Z0K7
AK003904 BAB23068 Q9Z0K7
AK029079 BAC26282 Q9Z0K7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slurp1 NP_065265 R.norvegicus Slurp1 300016   NP_001124016 94
H.sapiens SLURP1 57152 Gene Info NP_065160 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)