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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tmprss2, transmembrane protease, serine 2
Sequence ID:NM_015775
Entrez Gene ID:50528
Ensembl ID:ENSMUSG00000000385

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 C2|16 20.65 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 97565987 - 97611066

 Exon Info From UCSC:
NM_015775

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2648878Full LengthBC038393transmembrane protease, serine 2
2648889Full LengthBC054348transmembrane protease, serine 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056590  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015775 NP_056590 Q9JIQ8 Ldl_recept_a
Trypsin

Related Sequences

 
mRNAGenPeptSwissProt
AF113596 AAF21308 Q9JIQ8
AF243500 AAF64186 Q9JIQ8
AF199362 AAF97867 Q9JIQ8
BC038393 AAH38393 Q9JIQ8
BC054348 AAH54348 Q9JIQ8
AK146047 BAE26858 Q3UKE3
AK161173 BAE36225 Q3TTU9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tmprss2 NP_056590 R.norvegicus Tmprss2 156435   NP_569108 92
H.sapiens TMPRSS2 7113 Gene Info NP_001128571 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)