Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Atp5a1, ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
Sequence ID:NM_007505
Entrez Gene ID:11946
Ensembl ID:ENSMUSG00000025428

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18 E3|18 50.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:18: 77774000 - 77782864

 Exon Info From UCSC:
NM_007505

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4500893Full LengthBC014854ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1
4190189IncompleteBC055892ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031531  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007505 NP_031531 Q03265 ATP-synt_ab
ATP-synt_ab_C
ATP-synt_ab_N

Related Sequences

 
mRNAGenPeptSwissProt
L01062 AAA37271 Q03265
BC014854 AAH14854 Q03265
AK043976 BAC31722 Q03265
AK076572 BAC36399 Q03265
AK146797 BAE27439 Q03265
AK150426 BAE29549 Q03265
AK150843 BAE29901 Q03265
AK151004 BAE30027 Q03265
AK151128 BAE30136 Q03265
AK151224 BAE30216 Q03265
AK151920 BAE30798 Q03265
AK152054 BAE30910 Q03265
AK152890 BAE31573 Q03265
AK157529 BAE34114 Q03265
AK159491 BAE35125 Q03265
AK159540 BAE35167 Q03265
AK159758 BAE35349 Q03265
AK160043 BAE35585 Q03265
AK164110 BAE37632 Q03265
AK164193 BAE37675 Q03265
AK166709 BAE38962 Q03265
AK166812 BAE39039 Q03265
AK167159 BAE39300 Q03265
AK167863 BAE39881 Q03265
AK168198 BAE40158 Q03265
AK168617 BAE40482 Q03265
AK168879 BAE40697 Q03265
AK168890 BAE40707 Q03265
AK168932 BAE40744 Q03265
AK169080 BAE40864 Q03265
AK169084 BAE40868 Q03265
AK169105 BAE40887 Q03265
AK169142 BAE40921 Q03265
AK169300 BAE41056 Q03265
AK169308 BAE41063 Q03265
AK169414 BAE41160 Q03265

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atp5a1 NP_031531 R.norvegicus Atp5a1 65262   NP_075581 99
H.sapiens ATP5A1 498 Gene Info NP_001001937 98
A.gambiae AgaP_AGAP005134 1274812   XP_314018 84
C.elegans H28O16.1 173134   NP_001021526 84
D.melanogaster blw 37617   NP_726243 82
N.crassa NCU02514 3881843   XP_965645 72
S.pombe atp1 2541526   NP_594919 72
S.cerevisiae ATP1 852177   NP_009453 71
A.thaliana atp1 3890462   NP_085571 70
A.thaliana AT2G07698 815374   NP_178788 69
P.falciparum PFB0795w 812757   XP_001349675 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)