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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Arpc3, actin related protein 2/3 complex, subunit 3
Sequence ID:NM_019824
Entrez Gene ID:56378
Ensembl ID:ENSMUSG00000029465

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 122396811 - 122405990

NM_019824 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
170122841936122842005
71170122846825122846924
171247122851655122851731
248316122853367122853435
317443122854132122854258
444538122855092122855186
539848122855877122856186

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4013537Full LengthBC013618actin related protein 2/3 complex, subunit 3
6395280Full LengthBC054440actin related protein 2/3 complex, subunit 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062798  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019824 NP_062798 Q9JM76 P21-Arc

Related Sequences

 
mRNAGenPeptSwissProt
BC013618 AAH13618 Q9JM76
BC054440 AAH54440 Q9JM76
AB038243 BAA90788 Q9JM76
AK003485 BAB22813 Q9JM76
AK005437 BAB24031 Q9JM76
AK171651 BAE42588 Q9JM76

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Arpc3 NP_062798 H.sapiens ARPC3 10094 Gene Info NP_005710 98
R.norvegicus Arpc3 288669   NP_001099403 97
A.gambiae AgaP_AGAP001712 1281462   XP_321377 66
D.melanogaster Arpc3B 32696   NP_573193 62
D.melanogaster Arpc3A 41917   NP_650498 60
C.elegans arx-5 176697   NP_499667 55
S.pombe arc3 2540144   NP_596291 55
A.thaliana ARPC3 842338   NP_564757 50
S.cerevisiae ARC18 851085   NP_013474 48
N.crassa NCU09572 3875830   XP_959683 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)