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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gbp6, guanylate binding protein 6
Sequence ID:NM_194336
Entrez Gene ID:100702
Ensembl ID:ENSMUSG00000079362

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E5|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 105214906 - 105293695

 Exon Info From UCSC:
NM_194336

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3495728Full LengthBC007143macrophage activation 2 like
4978977Full LengthBC057969macrophage activation 2 like
40085916Full LengthBC115768macrophage activation 2 like
30073198IncompleteBC052867macrophage activation 2 like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_919317  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_194336 NP_919317 Q6ZQL8 GBP
GBP_C

Related Sequences

 
mRNAGenPeptSwissProt
BC007143 AAH07143 Q05DL4
BC052867 AAH52867 Q7TMV8
BC057969 AAH57969 Q6PEN2
BC115768 AAI15769 Q6ZQL8
AK128993 BAC87667 Q6ZQL8
AK152226 BAE31053 Q3U8G5
BK005759 DAA05845 Q6ZQL8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gbp6 NP_919317 M.musculus Gbp10 626578 Gene Info NP_001034735 98
M.musculus Gbp11 634650 Gene Info NP_001034736 86
M.musculus Gbp9 236573 Gene Info NP_766365 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)