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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Amigo1, adhesion molecule with Ig like domain 1
Sequence ID:NM_001004293
NM_146137
Entrez Gene ID:229715
Ensembl ID:ENSMUSG00000050947

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F2.3|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 108186667 - 108188991

 Exon Info From UCSC:
NM_001004293
NM_146137

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3498778Full LengthBC010598adhesion molecule with Ig like domain 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001004293  NP_666249  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001004293 NP_001004293 Q80ZD8 ig
LRR_1
NM_146137 NP_666249 Q80ZD8 ig
LRR_1

Related Sequences

 
mRNAGenPeptSwissProt
BC010598 AAH10598 Q80ZD8
BC022907 AAH22907 Q80ZD8
AY237008 AAO48949 Q80ZD8
AK035960 BAC29259 Q80ZD8
AB167509 BAD12541 Q80ZD8
AK173118 BAD32396 Q80ZD8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Amigo1 NP_001004293 R.norvegicus Amigo1 295365   NP_996764 95
H.sapiens AMIGO1 57463 Gene Info NP_065754 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)