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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ica1, islet cell autoantigen 1
Sequence ID:NM_001252266
NM_010492
Entrez Gene ID:15893
Ensembl ID:ENSMUSG00000062995

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 A1-A2|6 2.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 8630675 - 8758382


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3487814Full LengthBC002030islet cell autoantigen 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034622  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001252266 NP_001239195    
NM_010492 NP_034622 P97411 ICA69
Arfaptin

Related Sequences

 
mRNAGenPeptSwissProt
U26460 AAB40939 P97411
U26459 AAC52992 P97411
U26461 AAC52993 P97411
U34595 AAC99989 P97411
BC002030 AAH02030 P97411
AK005965 BAB24343  
AK016989 BAB30540  
AB303567 BAF62430 A5A8K4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ica1 NP_034622 R.norvegicus Ica1 81024   NP_110471 95
H.sapiens ICA1 3382 Gene Info NP_004959 90
C.elegans ric-19 191757   NP_491216 42
A.gambiae AgaP_AGAP006627 1277213   XP_316657 41
D.melanogaster CG10566 40331   NP_649283 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)