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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cdk9, cyclin-dependent kinase 9 (CDC2-related kinase)
Sequence ID:NM_130860
Entrez Gene ID:107951
Ensembl ID:ENSMUSG00000009555

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 B|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 32707437 - 32712656

NM_130860 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
125083256130132563808
250926573256498632565134
265828293256529232565463
283029963256556232565728
299730873256599632566086
308831693256755032567631
317033893256808432568303

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3601310Full LengthBC003901cyclin-dependent kinase 9 (CDC2-related kinase)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_570930  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_130860 NP_570930 Q99J95 EC 2.7.11.23
EC 2.7.11.22
Pkinase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC003901 AAH03901 Q99J95 EC 2.7.11.23
EC 2.7.11.22
AF327431 AAK15699 Q99J95 EC 2.7.11.23
EC 2.7.11.22
AK089276 BAC40824 Q99J95 EC 2.7.11.23
EC 2.7.11.22
AK142397 BAE25055 Q99J95 EC 2.7.11.23
EC 2.7.11.22
AK143217 BAE25312 Q99J95 EC 2.7.11.23
EC 2.7.11.22
AK144607 BAE25966 Q99J95 EC 2.7.11.23
EC 2.7.11.22
AK157340 BAE34054 Q99J95 EC 2.7.11.23
EC 2.7.11.22

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cdk9 NP_570930 R.norvegicus Cdk9 362110   NP_001007744 100
H.sapiens CDK9 1025 Gene Info NP_001252 99
A.gambiae AgaP_AGAP008541 1275410   XP_314652 73
D.melanogaster Cdk9 37586   NP_477226 73
C.elegans cdk-9 173023   NP_492906 56
S.cerevisiae SGV1 856290   NP_015487 45
S.pombe cdk9 2540239   NP_595616 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)