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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Arx, aristaless related homeobox
Sequence ID:NM_007492
Entrez Gene ID:11878
Ensembl ID:ENSMUSG00000035277

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X C3|X 33.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:X: 93286521 - 93298053

NM_007492 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12789053198490532261
27911619053388190534763
116212079053720090537245
120815369053994890540276
153727299054250190543693

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5707995Full LengthBC052033aristaless related homeobox

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031518  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007492 NP_031518 O35085 Homeobox
OAR

Related Sequences

 
mRNAGenPeptSwissProt
BC052033 AAH52033 O35085
AB006103 BAA28284 O35085

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Arx NP_031518 R.norvegicus Arx 317268   NP_001093644 99
H.sapiens ARX 170302 Gene Info NP_620689 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)