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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. H2-Ke6, H2-K region expressed gene 6
Sequence ID:NM_013543
Entrez Gene ID:14979
Ensembl ID:ENSMUSG00000073422

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 B1|17 18.48 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 34026032 - 34028055

NM_013543 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
182103416297734163169
2112853416334034163414
2863283416360734163649
3294133416379534163879
4144993416396034164045
5005923416414734164239
5937093416435034164466
7109273416456734164784
9289813416494634164999

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6775958Full LengthBC086927H2-K region expressed gene 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038571  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_013543 NP_038571 P50171 EC 1.1.1.63
EC 1.1.1.62
adh_short
KR

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC086927 AAH86927 P50171 EC 1.1.1.63
EC 1.1.1.62

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus H2-Ke6 NP_038571 R.norvegicus Hsd17b8 361802   NP_997694 97
H.sapiens HSD17B8 7923 Gene Info NP_055049 88
A.gambiae AgaP_AGAP009633 1279007   XP_318664 53
D.melanogaster CG3603 31289   NP_570046 52
C.elegans dhs-25 180486   NP_508282 51
C.elegans dhs-11 176485   NP_499346 51
A.thaliana AT1G24360 839053   NP_564216 42
P.falciparum FabG 813505   XP_001352100 40
N.crassa NCU09035 3875133   XP_958982 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)