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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Amy2a5, amylase 2a5
Sequence ID:XM_003689349
NM_001042711
Entrez Gene ID:109959
Ensembl ID:ENSMUSG00000074268

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F3|3 50.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 113249177 - 113258696

NM_001042711 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1223113052095113052317
224349113054419113054544
350468113054653113054771
469568113055935113056034
569691113056127113056249
692825113056927113057060
8261056113058727113058957
10571245113059690113059878
12461392113060955113061101
13931577113061432113061616

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015743Full LengthBC148724amylase 2-2, pancreatic
100014719BC141472amylase 2-2, pancreatic

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001042711 NP_001036176 P00688 EC 3.2.1.1  
NM_001160150 NP_001153622      
NM_001160151 NP_001153623      
NM_001160152 NP_001153624      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M11895 AAA37224 P00688 EC 3.2.1.1
BC094924 AAH94924 P00688 EC 3.2.1.1
BC100579 AAI00580 P00688 EC 3.2.1.1
BC141472 AAI41473    
BC148724 AAI48725    
AK078968 BAC37484 Q8C5B4  
AK133526 BAE21706 P00688 EC 3.2.1.1
V00718 CAA24098 P00688 EC 3.2.1.1
X02576 CAA26413 P00688 EC 3.2.1.1
X02577 CAA26414 P00688 EC 3.2.1.1
X02578 CAA26415 P00688 EC 3.2.1.1
X02579 CAA26417 Q61297  
X02580 CAA26418 Q61298  
XM_003084551 XP_003084599    
XM_003689349 XP_003689397    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Amy2a5 NP_001036176 M.musculus Amy2a3 100043686   NP_001153623 100
M.musculus Amy2a2 100043688   NP_001153624 100
M.musculus Amy2a4 100043684   NP_001153622 100
R.norvegicus Amy2 497039   NP_113690 94
H.sapiens AMY2A 279 Gene Info NP_000690 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)