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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ccr1, chemokine (C-C motif) receptor 1
Sequence ID:NM_009912
Entrez Gene ID:12768
Ensembl ID:ENSMUSG00000025804

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 F|9 71.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 123962840 - 123968692

NM_009912 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12433123876958123879390
24342831123883127123883524

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3992755Full LengthBC011092chemokine (C-C motif) receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034042  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009912 NP_034042 Q8BVW4
P51675
7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
U29678 AAA86119 P51675
BC011092 AAH11092 P51675
AK031109 BAC27256 Q8BMH9
AK036597 BAC29500 P51675
AK036690 BAC29535 P51675
AK076275 BAC36284 Q8BVW4
CT010178 CAJ18386 Q4FK73

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ccr1 NP_034042 R.norvegicus Ccr1 57301   NP_065417 93
H.sapiens CCR1 1230 Gene Info NP_001286 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta