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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ap1b1, adaptor protein complex AP-1, beta 1 subunit
Sequence ID:NM_001243043
NM_001243044
NM_007454
Entrez Gene ID:11764
Ensembl ID:ENSMUSG00000009090

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11|11 A2

Chromosomal Position (from UCSC)

Chromosomal Position:11: 4947520 - 5042729


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3601435Full LengthBC008513adaptor protein complex AP-1, beta 1 subunit
30465759IncompleteBC066827adaptor protein complex AP-1, beta 1 subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031480  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001243043 NP_001229972    
NM_001243044 NP_001229973    
NM_007454 NP_031480 O35643 Adaptin_N
Alpha_adaptinC2

Related Sequences

 
mRNAGenPeptSwissProt
BC008513 AAH08513 O35643
BC066827 AAH66827 Q6NXY3
AK034140 BAC28603 Q8CC13
AK155892 BAE33487 Q3U1K9
AK159273 BAE34952 O35643
AK160042 BAE35584 Q3TVN4
Y07919 CAA69224 O35643

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ap1b1 NP_031480 R.norvegicus Ap1b1 29663   NP_058973 98
H.sapiens AP1B1 162 Gene Info NP_001118 97
D.melanogaster Bap 32987   NP_523415 77
C.elegans apb-1 175376   NP_001022937 67
A.thaliana AT4G23460 828445   NP_194077 63
A.thaliana AT4G11380 826741   NP_001190701 62
N.crassa NCU09721 3875098   XP_958960 57
P.falciparum PFE1400c 813094   XP_001351835 55
S.pombe apl2 2541255   NP_595274 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)