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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Slc22a4, solute carrier family 22 (organic cation transporter), member 4
Sequence ID:NM_019687
Entrez Gene ID:30805
Ensembl ID:ENSMUSG00000020334

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B1.3|11 28.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 53983309 - 54028088

NM_019687 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15605379662753797186
5616965379997953800114
6978795380228353802465
88010945380412553804339
109511955380548653805586
119613225380946553809591
132314945381087853811049
149516495381889553819049
165017535382126953821372
175422605384108553841591

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3670138Full LengthBC010590solute carrier family 22 (organic cation transporter), member 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062661  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019687 NP_062661 Q9Z306
Q5SWV1
MFS_1

Related Sequences

 
mRNAGenPeptSwissProt
BC010590 AAH10590 Q9Z306
Q5SWV1
AB016257 BAA36626 Q9Z306
Q5SWV1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc22a4 NP_062661 H.sapiens SLC22A4 6583 Gene Info NP_003050 85
A.thaliana 1-Oct 843656   NP_565059 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)