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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Vcpip1, valosin containing protein (p97)/p47 complex interacting protein 1
Sequence ID:NM_173443
Entrez Gene ID:70675
Ensembl ID:ENSMUSG00000045210

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 A2|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 9745969 - 9746567

NM_173443 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19217297132779715430
2173225997270469727132
2260519297355309738462

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6406239Full LengthBC059209valosin containing protein (p97)/p47 complex interacting protein 1
3591498IncompleteBC006059valosin containing protein (p97)/p47 complex interacting protein 1
30076659IncompleteBC052908valosin containing protein (p97)/p47 complex interacting protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_775619  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_173443 NP_775619   OTU

Related Sequences

 
mRNAGenPeptSwissProt
BC006059 AAH06059 Q05DM9
BC052908 AAH52908 Q8CDG3
BC059209 AAH59209 Q8CDG3
AK030104 BAC26787 Q8CDG3
AK077494 BAC36830 Q8CDG3
AK122563 BAC65845 Q80T83
AK144688 BAE26014 Q3UMT4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vcpip1 NP_775619 R.norvegicus Vcpip1 286761   NP_789827 99
H.sapiens VCPIP1 80124 Gene Info NP_079330 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)