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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rdh10, retinol dehydrogenase 10 (all-trans)
Sequence ID:NM_133832
Entrez Gene ID:98711
Ensembl ID:ENSMUSG00000025921

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 A3|1 12.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 16105773 - 16131511

NM_133832 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14251609596216096386
4266611609787516098110
6627601611824516118343
7619061611927616119421
90710381612115516121286
103922951612137416122630

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4923005Full LengthBC019796retinol dehydrogenase 10 (all-trans)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598593  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_133832 NP_598593 Q8VCH7 EC 1.1.1.300 adh_short

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC019796 AAH19796 Q8VCH7 EC 1.1.1.300
AF456767 AAN64749 Q8VCH7 EC 1.1.1.300

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rdh10 NP_598593 H.sapiens RDH10 157506 Gene Info NP_742034 99
R.norvegicus Rdh10 353252   NP_852143 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)