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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Opa1, optic atrophy 1
Sequence ID:NM_001199177
NM_133752
Entrez Gene ID:74143
Ensembl ID:ENSMUSG00000038084

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 B2|16 21.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 29579341 - 29652490


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861686Full LengthBC138665optic atrophy 1 homolog (human)
40131262Full LengthBC145959optic atrophy 1 homolog (human)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598513  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001199177 NP_001186106    
NM_133752 NP_598513 P58281 Dynamin_N

Related Sequences

 
mRNAGenPeptSwissProt
BC025160 AAH25160 P58281
BC138665 AAI38666 P58281
BC145959 AAI45960 P58281
AB044138 BAB59000 P58281
AK029157 BAC26331 P58281
AK038446 BAC30002 P58281
AK044657 BAC32021 P58281
AK050383 BAC34224 P58281
AK053861 BAC35561 Q8BK99
AK122311 BAC65593 Q80TX7
AK145620 BAE26544 P58281

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Opa1 NP_598513 R.norvegicus Opa1 171116   NP_598269 99
H.sapiens OPA1 4976 Gene Info NP_570846 97
A.gambiae AgaP_AGAP011286 1270645   XP_309360 59
D.melanogaster opa1-like 36578   NP_725369 58
C.elegans eat-3 174476   NP_495986 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)