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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Htra3, HtrA serine peptidase 3
Sequence ID:NM_001042615
NM_030127
Entrez Gene ID:78558
Ensembl ID:ENSMUSG00000029096

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5|5 B1

Chromosomal Position (from UCSC)

Chromosomal Position:5: 35661561 - 35671090

 Exon Info From UCSC:
NM_001042615
NM_030127

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861607Full LengthBC138587HtrA serine peptidase 3
8861608Full LengthBC138588HtrA serine peptidase 3
4216219IncompleteBC022646HtrA serine peptidase 3
6430493IncompleteBC056216HtrA serine peptidase 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084403  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001042615 NP_001036080    
NM_030127 NP_084403 Q9D236 Trypsin
PDZ
Kazal_2

Related Sequences

 
mRNAGenPeptSwissProt
BC022646 AAH22646 Q8R221
BC138587 AAI38588 Q9D236
BC138588 AAI38589 Q9D236
AY037300 AAK70226 Q9D236
AY156509 AAO17289 Q9D236
AY280664 AAQ16583 Q9D236

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Htra3 NP_084403 R.norvegicus Htra3 360959   XP_341238 98
H.sapiens HTRA3 94031 Gene Info NP_444272 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)