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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Chaf1b, chromatin assembly factor 1, subunit B (p60)
Sequence ID:NM_028083
Entrez Gene ID:110749
Ensembl ID:ENSMUSG00000022945

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 C4|16 67.4 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 93883900 - 93906106

 Exon Info From UCSC:
NM_028083

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4238801Full LengthBC013532chromatin assembly factor 1, subunit B (p60)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082359  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028083 NP_082359 Q9D0N7 WD40

Related Sequences

 
mRNAGenPeptSwissProt
BC013532 AAH13532 Q9D0N7
AK011243 BAB27490 Q9D0N7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chaf1b NP_082359 R.norvegicus Chaf1b 288242   NP_001019912 92
H.sapiens CHAF1B 8208 Gene Info NP_005432 84
D.melanogaster Caf1-105 36107   NP_610589 46
A.gambiae AgaP_AGAP007544 1269690   XP_308335 45
A.thaliana FAS2 836584   NP_974991 42
N.crassa NCU08357 3881400   XP_965260 41
S.pombe pcf2 2542071   NP_594450 39
S.cerevisiae CAC2 854869   NP_013605 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)