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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mettl20, methyltransferase like 20
Sequence ID:NM_001252094
NM_001252095
NM_001252096
NM_001252097
NM_177101
Entrez Gene ID:320204
Ensembl ID:ENSMUSG00000039958

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 G3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 149149371 - 149152567

Transcript StartTranscript EndChromosomal Start Chromosomal End
1108149090118149090225
109517149092555149092963
518648149095679149095809
6491477149098863149099691

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3373106Full LengthBC065807RIKEN cDNA 4833442J19 gene
6328428Full LengthBC048711RIKEN cDNA 4833442J19 gene
6491688Full LengthBC046911RIKEN cDNA 4833442J19 gene
3500612IncompleteBC018279RIKEN cDNA 4833442J19 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_796075  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001252094 NP_001239023    
NM_001252095 NP_001239024    
NM_001252096 NP_001239025    
NM_001252097 NP_001239026    
NM_177101 NP_796075 Q80ZM3 PrmA

Related Sequences

 
mRNAGenPeptSwissProt
BC018279 AAH18279 Q80ZM3
BC046911 AAH46911 Q80VP4
BC048711 AAH48711 Q80ZM3
BC065807 AAH65807 Q80ZM3
AK077292 BAC36734 Q8BPB7
AK132096 BAE20980 Q80ZM3
AK160463 BAE35803 Q8BPB7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus 4833442J19Rik NP_796075 R.norvegicus Mettl20 316976   NP_942067 93
H.sapiens METTL20 254013 Gene Info NP_776163 79
A.gambiae AgaP_AGAP007652 1269575   XP_308218 43
C.elegans C37A2.6 183284   NP_491943 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)